Dr. Amaryllis Vidalis
Kustodin / Curator
Herbarium Hamburgense
Anschrift
Universität Hamburg
Ohnhorststraße 18
22609 Hamburg
Büro
Feodor Lynen
Raum: 2.303
Kontakt
Tel.: +49 40 2395 23861
Schwerpunkte
- Sammlungsmanagement Herbarium Hamburgense / Collection Management Herbarium Hamburgense
- Forstgenetik, Genetik und Genomik der Anpassung, Evolution der Pflanzen / Forest Genetics, Genetics and Genomics of Adaptation, Plant Evolution
Curriculum vitae
| 2022-2025 | Head of Scientific Operations (Wissenschaftliche Geschäftsführung) Bavarian Natural History Collections (SNSB), Munich Germany |
| 2017-2022 | Science Manager - Office for Research and Innovation, Technical University of Munich (TUM), Germany |
| 2016-2017 | Research Associate Chair of Population Epigenetics and Epigenomics, Weihenstephan Center for Life and Food Sciences Weihenstephan, TUM, Gemany |
| 2016 | Research Engineer, chief, Department of Ecology and Environmental Sciences, Umeå University, Sweden |
| 2015 | Research Associate at the Section of Population Genetics, Center for Life and Food Sciences Weihenstephan, TUM, Gemany |
| 2014-2015 | Research Engineer, chief, Department of Ecology and Environmental Sciences, Umeå University, Sweden |
| 2012-2014 | Postdoctoral researcher in Evolutionary Genetics Group, Department of Ecology and Environmental Sciences, Umeå University, Sweden |
| 2010-2012 | Research Associate at the Georg-August University Göttingen, Faculty of Forest Sciences and Forest Ecology, Büsgen Institute, Department of Forest Genetics and Forest Tree Breeding, Germany |
| 2006-2010 | Doctoral work, Section of Forest Genetics and Forest Tree Breeding, Georg-August University, Göttingen, Germany |
| 2005-2026 | Forest Scientist at the Department of Forest Digital Mapping, Head Office of the Forest Department of the District of Corinth, Ministry of Agricultural Development, Greece |
| 1999-2004 | Studium Diploma (B.Sc. + M.Sc.) - Faculty of Forestry, Environmental Sciences and Natural Resources, Democritus University of Thrace, Greece |
Forschungsprojekte / Research Projects
| 2016-2017 | Evolution of DNA methylation in plants |
| 2015 | Maize Genomics, Epigenomics of wild Tomato (Synbreed Project, BMBF) |
| 2014-2015 | Fluorescence in situ Hybridization of LTR elements in conifer species, (ProcoGen, EU Project) |
| 2012-2014 | Exome capture-based marker development for linkage and association mapping studies in Picea abies (Norway Spruce Genome Project) |
| 2011-2012 | Translocation experiments and SNP analysis of adaptation in European oaks (EVOLTREE project, in collaboration with INRA, Bordeaux, France) |
| 2006-2010 | Ph.D. Thesis “Patterns of nucleotide variation and gene-associated SNP analysis in a mixed Quercus spp. forest at isocitrate dehydrogenase genes” |
| 2006-2007 | Bilateral research project, Greece – Germany (IKYDA): Research of diversity in beech populations (Fagus sylvatica L.) in Greece using morphological traits and molecular markers |
Publikationen / Publications
- Boutsios, S., Vidalis, A., Adamidis, G.C. et al. Diversity in Shade and Light Leaf Morphology in Beech Populations of South Rodopi Mountains. Proc. Natl. Acad. Sci., India, Sect. B Biol. Sci., 2020
- Bernhardsson C., Vidalis A., Wang X., Scofield D. G., Shiffthaler B., Baison J., Street N. R., Garcia-Gil M. R., Ingvarsson P. K.: An Ultra-Dense Haploid Genetic Map for Evaluating the Highly Fragmented Genome Assembly of Norway Spruce (Picea abies), G3, 2019
- Baison, J.; Vidalis, A.; Zhou, L.; Chen, Z.; Li, Z.; Sillanpää, M.; Bernhardsson, C.; Scofield, D.; Forsberg, N.; Grahn, T.; Olsson, L.; Karlsson, B.; Wu, H.; Ingvarsson, P. K.; Lundqvist, S-O.; Niittylä, T.; Garcia Gil, R.: Genome-Wide Association Study (GWAS) identified candidate loci affecting wood formation in Norway spruce. The Plant Journal, 2019
- Vidalis A.*, Scofield D. G., Neves L. G., Bernhardsson C, Garcia Gil M. R., Ingvarsson P. K.: Design and evaluation of a large sequence-capture probe set and associated SNPs for diploid and haploid samples of Norway spruce (Picea abies). bioRχive, 2018
- Taudt A. S., Roquis, D., Vidalis, A., Wardenaar, R., Johannes, F., Colome Tatche, M.*: METHimpute: Imputation-guided construction of complete methylomes from WGBS data. BMC Genomics, 2018
- Cossu R. M., Casola C., Giacomello S., Vidalis A., Scofield D. G.*, Zuccolo A.*: Low levels of unequal recombination are associated with high rates of intraelement gene conversion in plant LTR retrotransposons. Genome Biology and Evolution, 2017
Vidalis, A., Zivkovic, D., Wardenaar, R., Roquis, D., Tellier, A. and Johannes, F.*: Methylome evolution in plants, Genome Biology Reviews, 2017 - Curtu, L. A., Craciunesc, I., Enescu C. M., Vidalis, A. and Sofletea N.: Fine scale spatial genetic structure in a multi-species oak forest. iForest, 2014
- Papageorgiou C. A., Tsiripidis I., Mouratidis T., Hatziskakis S., Gailing O., Eliades N.-G.H., Vidalis A., Drouzas A. D., Finkeldey R. Complex fine-scale phylogeographic patterns in a putative refugial region of Fagus sylvatica L. (Fagaceae). Botanical Journal of the Linnean Society, 2014
- Vidalis, A.*, Curtu, A. L., Finkeldey, R.: Novel SNP development and analysis at a NADP+ specific IDH enzyme gene in a four-species mixed oak forest. Plant Biology, 2013
- Ph.D. Dissertation: “Patterns of nucleotide variation and gene-associated SNP analysis in a Quercus spp. forest at isocitrate dehydrogenase genes” 2011. Online electronic publication of the Niedersächsische Staats- und Universitätsbibliothek Göttingen
- Papageorgiou, A.C., Vidalis, A., Gailing, O., Tsiripidis, I., Hatziskakis, S., Boutsios, S., Galatsidas, S., Finkeldey, R.: Genetic variation of beech (Fagus sylvatica L.) in Rodopi (N.E. Greece). European Journal of Forest Research 127, 81-88, 2008
(*: CORRESPONDANCE)